Itk-snap

Itk-snap

Quantitative imaging using CT

Published in Ruijiang Li, Lei Xing, Sandy Napel, Daniel L. Rubin, Radiomics and Radiogenomics, 2019

Lin Lu, Lawrence H. Schwartz, Binsheng Zhao

3D Slicer and ITK-SNAP are two popular segmentation software packages that are publicly available. 3D Slicer is an open source software available for multiple operating systems, including Linux, MacOSX, and Windows. It is a platform that provides image analysis (e.g., registration and interactive segmentation) and visualization (e.g., volume rendering) of medical images including CT, MRI, and positron emission tomography (PET). ITK-SNAP [43] is an easy-to-use software tool that provides semi-automatic segmentation using active contour methods, as well as manual delineation and image navigation.

Stereoscopic augmented reality for single camera endoscopy: a virtual study

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Journal Information

Published in Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, 2018

Yen-Yu Wang, Atul Kumar, Kai-Che Liu, Shih-Wei Huang, Ching-Chun Huang, Wei-Chia Su, Fu-Li Hsiao, Wen-Nung Lie

An intraoperative abdominal model (IOUSFAN, Kyoto Kagaku Co. Ltd., Kyoto, Japan), manufactured specifically for ultrasound and laparoscopic applications, was used in this study. The model was encased in a plastic box (Figure 2) (left panel) to produce the complete phantom. CT scan images of the phantom were acquired and the segmented images were used to reconstruct its 3D virtual model (Figure 2). The segmentation and reconstruction process were carried out using ITK-snap software (Ibanez et al. 2003).

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Quantitative imaging using CT

Stereoscopic augmented reality for single camera endoscopy: a virtual study